Phylogenetic analyses with systematic taxon sampling show that mitochondria branch within Alphaproteobacteria

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منابع مشابه

Taxon sampling and the accuracy of phylogenetic analyses

Appropriate and extensive taxon sampling is one of the most important determinants of accurate phylogenetic estimation. In addition, accuracy of inferences about evolutionary processes obtained from phylogenetic analyses is improved significantly by thorough taxon sampling efforts. Many recent efforts to improve phylogenetic estimates have focused instead on increasing sequence length or the nu...

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Increased taxon sampling greatly reduces phylogenetic error.

Several authors have argued recently that extensive taxon sampling has a positive and important effect on the accuracy of phylogenetic estimates. However, other authors have argued that there is little benefit of extensive taxon sampling, and so phylogenetic problems can or should be reduced to a few exemplar taxa as a means of reducing the computational complexity of the phylogenetic analysis....

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Highly Incomplete Taxa Can Rescue Phylogenetic Analyses from the Negative Impacts of Limited Taxon Sampling

BACKGROUND Phylogenies are essential to many areas of biology, but phylogenetic methods may give incorrect estimates under some conditions. A potentially common scenario of this type is when few taxa are sampled and terminal branches for the sampled taxa are relatively long. However, the best solution in such cases (i.e., sampling more taxa versus more characters) has been highly controversial....

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Taxon sampling affects inferences of macroevolutionary processes from phylogenetic trees.

Bertrand, Y., and M. Härlin. 2006. Stability and universality in the application of taxon names in phylogenetic nomenclature. Syst. Biol. 55:848–858. Bininda-Emonds, O. R. P. 2004. The evolution of supertrees. Trends Ecol. Evol. 19:315–322. Bryant, H. N., and P. D. Cantino. 2002. A review of criticisms of phylogenetic nomenclature: Is taxonomic freedom the fundamental issue? Biol. Rev. 77:39–55...

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Increased taxon sampling is advantageous for phylogenetic inference.

PURVIS, A. 1995b.A modiŽcation to Baum and Ragan’s method for combining phylogenetic trees. Syst. Biol. 44:251–255. PURVIS, A., AND L. BROMHAM. 1997. Estimating the transition/transversion ratio from independent pairwise comparisonswith an assumedphylogeny. J.Mol. Evol. 44:112–119. PURVIS, A., S. NEE, AND P. HARVEY. 1995. Macroevolutionary inferences from primate phylogeny. Proc. R. Soc. Lond. ...

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ژورنال

عنوان ژورنال: Nature Ecology & Evolution

سال: 2020

ISSN: 2397-334X

DOI: 10.1038/s41559-020-1239-x